STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aazo_4446KEGG: npu:Npun_F1297 secretion protein HlyD family protein; TIGRFAM: ABC exporter membrane fusion protein, DevB family; PFAM: secretion protein HlyD family protein. (399 aa)    
Predicted Functional Partners:
Aazo_4445
DevC protein; KEGG: npu:Npun_F1298 DevC protein; TIGRFAM: DevC protein; PFAM: protein of unknown function DUF214.
 
  
 0.903
Aazo_0091
DevC protein; KEGG: npu:Npun_R5575 DevC protein; TIGRFAM: DevC protein; PFAM: protein of unknown function DUF214.
 
  
 0.825
Aazo_3920
DevC protein; KEGG: ana:all5346 hypothetical protein; TIGRFAM: DevC protein; PFAM: protein of unknown function DUF214.
  
  
 0.806
Aazo_4444
TIGRFAM: ABC exporter ATP-binding subunit, DevA family; PFAM: ABC transporter related; KEGG: npu:Npun_F1299 ABC transporter related; SMART: AAA ATPase.
 
 
 0.750
Aazo_5078
PFAM: outer membrane efflux protein; KEGG: npu:Npun_R2885 outer membrane efflux protein.
 
 
 0.742
Aazo_2826
PFAM: protein of unknown function DUF214; KEGG: ana:alr0452 hypothetical protein.
  
  
 0.668
Aazo_0090
TIGRFAM: ABC exporter ATP-binding subunit, DevA family; PFAM: ABC transporter related; KEGG: npu:Npun_R5574 ABC transporter related; SMART: AAA ATPase.
 
 
 0.554
Aazo_2492
KEGG: ana:all3144 hypothetical protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.508
Aazo_2827
KEGG: ava:Ava_2852 ABC transporter-like; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
 0.496
Aazo_1837
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; cyclic nucleotide-binding; KEGG: ana:alr4239 toxin secretion ABC transporter ATP-binding protein; SMART: AAA ATPase; cyclic nucleotide-binding.
  
 
 0.461
Your Current Organism:
Nostoc azollae
NCBI taxonomy Id: 551115
Other names: '. azollae' 0708, 'Nostoc azollae' 0708, Anabaena azollae 0708
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