STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aazo_5139Signal transduction histidine kinase, LytS; KEGG: cyc:PCC7424_0637 hypothetical protein. (522 aa)    
Predicted Functional Partners:
Aazo_5138
PFAM: transport-associated; KEGG: ava:Ava_0596 transport-associated protein.
 
    0.847
psbA
Photosystem q(b) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
   
   0.743
psbA-2
Photosystem q(b) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
   
   0.743
psbD
Photosystem II D2 protein (photosystem q(a) protein); Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a s [...]
   
 
 0.739
Aazo_3778
KEGG: npu:Npun_F4553 photosystem II D2 protein (photosystem q(a) protein); TIGRFAM: photosystem II D2 protein (photosystem q(a) protein); PFAM: photosynthetic reaction centre protein.
   
 
 0.739
Aazo_4099
PFAM: transport-associated; KEGG: npu:Npun_R5742 transport-associated.
 
    0.726
Aazo_4651
KEGG: npu:Npun_F4199 hypothetical protein.
  
     0.678
Aazo_4677
KEGG: ava:Ava_2036 hypothetical protein.
 
  
 0.600
Aazo_3129
KEGG: npu:Npun_R1075 hypothetical protein.
  
     0.561
Aazo_1721
KEGG: ana:all1273 hypothetical protein.
  
     0.550
Your Current Organism:
Nostoc azollae
NCBI taxonomy Id: 551115
Other names: '. azollae' 0708, 'Nostoc azollae' 0708, Anabaena azollae 0708
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