STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378345_00157Unannotated protein. (213 aa)    
Predicted Functional Partners:
GCA_000378345_00156
Unannotated protein.
 
  
 0.978
GCA_000378345_02967
Unannotated protein.
 
  
 0.929
GCA_000378345_01572
Unannotated protein.
  
  
 
0.812
GCA_000378345_00158
Unannotated protein.
 
     0.778
GCA_000378345_01504
Unannotated protein.
     
 0.767
GCA_000378345_00117
Unannotated protein.
 
 
 0.728
GCA_000378345_00057
Unannotated protein.
 
 
 0.721
GCA_000378345_00155
Unannotated protein.
 
   
 0.694
GCA_000378345_01575
Unannotated protein.
  
  
 0.627
GCA_000378345_00154
Unannotated protein.
       0.536
Your Current Organism:
Hirschia maritima
NCBI taxonomy Id: 551275
Other names: H. maritima DSM 19733, Hirschia maritima DSM 19733, Hirschia sp. GSW-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.