STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378345_01650Unannotated protein. (196 aa)    
Predicted Functional Partners:
GCA_000378345_02023
Unannotated protein.
 
 
 0.952
GCA_000378345_02683
Unannotated protein.
  
 
 0.922
GCA_000378345_02759
Unannotated protein.
    
 
 0.919
GCA_000378345_01917
Unannotated protein.
   
 0.827
GCA_000378345_01316
Unannotated protein.
  
 
  0.825
GCA_000378345_01166
Unannotated protein.
    
 0.818
GCA_000378345_01918
Unannotated protein.
    
 0.818
GCA_000378345_02884
Unannotated protein.
    
 0.818
GCA_000378345_01317
Unannotated protein.
    
  0.798
GCA_000378345_01920
Unannotated protein.
    
  0.798
Your Current Organism:
Hirschia maritima
NCBI taxonomy Id: 551275
Other names: H. maritima DSM 19733, Hirschia maritima DSM 19733, Hirschia sp. GSW-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.