STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378345_01937Unannotated protein. (128 aa)    
Predicted Functional Partners:
GCA_000378345_01936
Unannotated protein.
       0.855
GCA_000378345_01935
Unannotated protein.
     
 0.669
GCA_000378345_02872
Unannotated protein.
 
    0.655
GCA_000378345_01938
Unannotated protein.
     
 0.629
GCA_000378345_01939
Unannotated protein.
       0.571
GCA_000378345_01910
Unannotated protein.
   
    0.562
GCA_000378345_02947
Unannotated protein.
   
    0.562
GCA_000378345_01941
Unannotated protein.
 
  
 0.539
GCA_000378345_00653
Unannotated protein.
 
    0.523
GCA_000378345_01261
Unannotated protein.
   
    0.473
Your Current Organism:
Hirschia maritima
NCBI taxonomy Id: 551275
Other names: H. maritima DSM 19733, Hirschia maritima DSM 19733, Hirschia sp. GSW-2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.