STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378345_02588Unannotated protein. (273 aa)    
Predicted Functional Partners:
GCA_000378345_02491
Unannotated protein.
 
 0.844
GCA_000378345_02584
Unannotated protein.
 
  
 0.820
GCA_000378345_02580
Unannotated protein.
 
   
 0.818
GCA_000378345_01270
Unannotated protein.
    
  0.811
GCA_000378345_02587
Unannotated protein.
 
  
 0.807
GCA_000378345_02581
Unannotated protein.
 
  
 0.806
GCA_000378345_01820
Unannotated protein.
 
 0.805
GCA_000378345_02582
Unannotated protein.
 
  
 0.800
GCA_000378345_02583
Unannotated protein.
 
     0.792
GCA_000378345_02586
Unannotated protein.
 
  
 0.784
Your Current Organism:
Hirschia maritima
NCBI taxonomy Id: 551275
Other names: H. maritima DSM 19733, Hirschia maritima DSM 19733, Hirschia sp. GSW-2
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.