STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_11820Uncharacterized protein. (113 aa)    
Predicted Functional Partners:
FSPOR_1395
Uncharacterized protein.
   
 0.561
FSPOR_18
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.557
FSPOR_3383
Transporter sec-13; Belongs to the WD repeat SEC13 family.
    
 0.546
FSPOR_5676
Pre-mrna-splicing factor 38b.
    
  0.526
FSPOR_5677
Uncharacterized protein.
    
  0.526
FSPOR_5567
60s ribosomal l37.
    
  0.526
FSPOR_7435
Nuclear pore; Belongs to the WD repeat SEC13 family.
    
 0.521
FSPOR_10551
PAC domain-containing protein.
    
 0.501
FSPOR_11589
Lactose permease; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
   0.434
FSPOR_10554
L-lactate dehydrogenase cytochrome.
   
   0.434
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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