STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_11575Pre-mrna-splicing atp-dependent rna helicase prp28; Belongs to the DEAD box helicase family. (719 aa)    
Predicted Functional Partners:
FSPOR_8863
Pre-mrna-splicing factor spp42.
   
 0.994
FSPOR_7197
Pre-mrna-splicing factor prp1.
   
 0.991
FSPOR_6341
Elongation factor 2.
   
 0.988
FSPOR_10891
Pre-mrna-splicing factor brr2.
   
 0.982
FSPOR_9374
Putative u5 snrnp-specific 40 kd protein, wd-40 repeat protein.
    
 0.980
FSPOR_9749
Small nuclear ribonucleoprotein e.
    
 0.978
FSPOR_8439
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.978
FSPOR_8463
Small nuclear ribonucleoprotein Sm D2.
    
 0.978
FSPOR_10624
Uncharacterized protein.
   
 0.973
FSPOR_10953
Uncharacterized protein.
   
 0.972
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.