STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_10196Rrna-processing protein utp23. (286 aa)    
Predicted Functional Partners:
FSPOR_7418
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.997
FSPOR_1983
U3 small nucleolar rna-associated 5.
   
 
 0.978
FSPOR_9684
Antigen lsa-1.
   
 
 0.971
FSPOR_551
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.968
FSPOR_5308
ATP-dependent rna helicase rok1.
   
 0.957
FSPOR_3835
Sas10 domain-containing protein.
   
 
 0.925
FSPOR_7218
U3 small nucleolar ribonucleo imp3.
   
 0.923
FSPOR_8427
Nop14-nuclear and nucleolar with possible role in ribosome biogenesis.
   
 
 0.922
FSPOR_4083
Sof1.
   
  0.910
FSPOR_2003
Putative utp7-u3 snornp.
   
 
 0.905
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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