STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_10096Seryl-trna synthetase. (502 aa)    
Predicted Functional Partners:
FSPOR_1838
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.913
FSPOR_10095
Putative actin-related protein ro7; Belongs to the actin family.
 
      0.899
FSPOR_5981
Seryl-trna synthetase.
  
  
 
0.897
FSPOR_314
Cytochrome b561 domain-containing protein.
 
      0.896
FSPOR_3811
Uncharacterized protein.
     
 0.824
FSPOR_11525
Glycyl-trna synthetase.
   
  
 0.813
FSPOR_11576
Valyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.798
FSPOR_9682
Lysine--tRNA ligase.
  
 
 0.771
FSPOR_9334
Tryptophanyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.750
FSPOR_1877
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 
 0.741
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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