STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_9633Uncharacterized protein. (691 aa)    
Predicted Functional Partners:
FSPOR_10625
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.997
FSPOR_10672
DNA-directed rna polymerase i subunit rpa43.
   
 0.997
FSPOR_8702
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.996
FSPOR_3829
Uncharacterized protein.
   
 0.992
FSPOR_4021
DNA-directed rna polymerase i and iii subunit rpac1.
   
 0.990
FSPOR_9273
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.980
FSPOR_11140
DNA-directed rna polymerase i, ii, and iii subunit rpabc1.
    
 0.975
FSPOR_6610
DNA-directed rna polymerase i and iii subunit rpac2.
   
 0.974
FSPOR_9270
DNAj like protein subfamily a member 3, mitochondrial.
   
 0.973
FSPOR_688
DNA-directed rna polymerases i.
   
 0.972
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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