STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_8549Geranylgeranyl pyrophosphate synthetase. (586 aa)    
Predicted Functional Partners:
FSPOR_11202
Rpp14 family.
   
 0.945
FSPOR_2949
Ribonuclease p mrp subunit rpp1.
    
 0.943
FSPOR_5967
Ribonuclease P protein subunit.
    
 0.942
FSPOR_8609
Uncharacterized protein.
    
 0.917
FSPOR_2835
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.899
FSPOR_10835
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 0.692
FSPOR_7693
H aca ribonucleo complex subunit 2.
    
 0.692
FSPOR_7104
Uncharacterized protein.
    
 0.692
FSPOR_5657
60s ribosomal l8.
    
 0.692
FSPOR_9567
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
   
 
 0.691
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.