STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_8482Nucleolar 9. (769 aa)    
Predicted Functional Partners:
FSPOR_3835
Sas10 domain-containing protein.
   
   0.966
FSPOR_274
Uncharacterized protein.
   
 
 0.950
FSPOR_9046
Nucleolar protein nop58like protein.
   
   0.935
FSPOR_5318
Multiple rna-binding domain-containing 1.
   
 
 0.907
FSPOR_6720
Uncharacterized protein.
   
   0.902
FSPOR_3523
Uncharacterized protein.
   
 
 0.902
FSPOR_2162
RNA helicase.
   
 
 0.896
FSPOR_7874
PUM-HD domain-containing protein.
   
  
 0.880
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.879
FSPOR_9743
ATP-dependent rna helicase dbp9.
   
 
 0.878
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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