STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_8350Alpha-l-rhamnosidase c. (795 aa)    
Predicted Functional Partners:
FSPOR_2080
Structural maintenance of chromosomes protein.
   
 0.993
FSPOR_9434
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
   
 0.992
FSPOR_10504
Condensin complex subunit 3.
   
 0.988
FSPOR_11879
AAA_23 domain-containing protein.
   
 0.983
FSPOR_4552
Structural maintenance of chromosomes protein.
   
 0.983
FSPOR_4805
Structural maintenance of chromosomes protein.
   
 0.883
FSPOR_5535
Structural maintenance of chromosome smc.
   
 0.863
FSPOR_11428
Uncharacterized protein.
   
 0.860
FSPOR_7997
Structural maintenance of chromosomes protein.
   
 0.860
FSPOR_7661
DNA repair rad18.
   
 0.838
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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