FSPOR_7547 protein (Fusarium sporotrichioides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FSPOR_7547

Uncharacterized protein. (242 aa)

Predicted Functional Partners:

FSPOR_3955

0.617

FSPOR_2971

0.617

FSPOR_10617

0.582

FSPOR_1695

0.582

FSPOR_3742

0.534

FSPOR_175

0.523

FSPOR_3952

0.503

FSPOR_4052

0.503

FSPOR_11851

0.502

FSPOR_4444

0.502

Your Current Organism:

Fusarium sporotrichioides

NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSPOR_10617	FSPOR_11851	A0A395RK25	A0A395RFY1	Signaling protein ykow.	Xyloglucanase.	0.454
FSPOR_10617	FSPOR_3742	A0A395RK25	A0A395SEB4	Signaling protein ykow.	Uncharacterized protein.	0.952
FSPOR_10617	FSPOR_4444	A0A395RK25	A0A395SBL4	Signaling protein ykow.	Prp 4 c.	0.454
FSPOR_10617	FSPOR_7547	A0A395RK25	A0A395RYS5	Signaling protein ykow.	Uncharacterized protein.	0.582
FSPOR_11851	FSPOR_10617	A0A395RFY1	A0A395RK25	Xyloglucanase.	Signaling protein ykow.	0.454
FSPOR_11851	FSPOR_1695	A0A395RFY1	A0A395SNI1	Xyloglucanase.	Signaling ykow.	0.454
FSPOR_11851	FSPOR_7547	A0A395RFY1	A0A395RYS5	Xyloglucanase.	Uncharacterized protein.	0.502
FSPOR_1695	FSPOR_11851	A0A395SNI1	A0A395RFY1	Signaling ykow.	Xyloglucanase.	0.454
FSPOR_1695	FSPOR_3742	A0A395SNI1	A0A395SEB4	Signaling ykow.	Uncharacterized protein.	0.952
FSPOR_1695	FSPOR_4444	A0A395SNI1	A0A395SBL4	Signaling ykow.	Prp 4 c.	0.454
FSPOR_1695	FSPOR_7547	A0A395SNI1	A0A395RYS5	Signaling ykow.	Uncharacterized protein.	0.582
FSPOR_175	FSPOR_7547	A0A395SVI5	A0A395RYS5	Putative kex; Belongs to the peptidase S8 family.	Uncharacterized protein.	0.523
FSPOR_2971	FSPOR_3742	A0A395SIA6	A0A395SEB4	Uncharacterized protein.	Uncharacterized protein.	0.689
FSPOR_2971	FSPOR_3952	A0A395SIA6	A0A395SE08	Uncharacterized protein.	Pyruvate carboxyltransferase domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.504
FSPOR_2971	FSPOR_4052	A0A395SIA6	A0A395SE80	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.504
FSPOR_2971	FSPOR_7547	A0A395SIA6	A0A395RYS5	Uncharacterized protein.	Uncharacterized protein.	0.617
FSPOR_3742	FSPOR_10617	A0A395SEB4	A0A395RK25	Uncharacterized protein.	Signaling protein ykow.	0.952
FSPOR_3742	FSPOR_1695	A0A395SEB4	A0A395SNI1	Uncharacterized protein.	Signaling ykow.	0.952
FSPOR_3742	FSPOR_2971	A0A395SEB4	A0A395SIA6	Uncharacterized protein.	Uncharacterized protein.	0.689
FSPOR_3742	FSPOR_3952	A0A395SEB4	A0A395SE08	Uncharacterized protein.	Pyruvate carboxyltransferase domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.673