STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_7009Tetratricopeptide repeat domain containing. (202 aa)    
Predicted Functional Partners:
FSPOR_1471
Transporter sec61 subunit gamma.
   
 
 0.850
FSPOR_10887
Translocation protein sec66.
    
 
 0.848
FSPOR_650
Translocation sec63.
    
 
 0.848
FSPOR_2441
Translocation sec62.
    
 
 0.847
FSPOR_4929
Transport sec61 alpha subunit.
    
 
 0.785
FSPOR_6502
Conidiophore development hyma.
   
 0.766
FSPOR_2916
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.664
FSPOR_11352
Uncharacterized protein.
    
 
 0.628
FSPOR_7045
DUF89 domain-containing protein.
 
      0.507
FSPOR_11322
5'-amp-activated protein kinase subunit beta-2.
     
 0.487
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.