STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_7137Rrna methyltransferase mitochondrial. (596 aa)    
Predicted Functional Partners:
FSPOR_2431
50s ribosomal l4.
   
 
 0.929
FSPOR_988
EngB-type G domain-containing protein.
  
 
 0.929
FSPOR_10838
TRUD domain-containing protein.
   
   0.919
FSPOR_7417
50s ribosomal l11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.918
FSPOR_2762
Mitochondrial ribosomal 8; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.914
FSPOR_9689
CMP/dCMP-type deaminase domain-containing protein.
  
 
 0.910
FSPOR_6736
Cmp dcmp zinc-binding.
  
 
 0.910
FSPOR_1838
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.905
FSPOR_465
60s ribosomal.
  
   0.904
FSPOR_11565
60s ribosomal protein l3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.899
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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