STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_5676Pre-mrna-splicing factor 38b. (340 aa)    
Predicted Functional Partners:
FSPOR_9867
50s ribosomal protein l23ae.
   
 0.994
FSPOR_8858
60s ribosomal l7.
  
 0.994
FSPOR_8801
60s ribosomal l32.
   
 0.994
FSPOR_8812
50s ribosomal l34e.
  
 0.994
FSPOR_7961
60s ribosomal l17; Belongs to the universal ribosomal protein uL22 family.
   
 0.994
FSPOR_5399
50s ribosomal l14e.
  
 0.994
FSPOR_2938
50s ribosomal l31e.
   
 0.994
FSPOR_306
60s ribosomal l27-a.
  
 0.994
FSPOR_465
60s ribosomal.
  
 0.994
FSPOR_188
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
  
 0.994
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.