STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_5355DNA repair rad5. (492 aa)    
Predicted Functional Partners:
FSPOR_11177
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
  
 
 0.907
FSPOR_9536
Werner syndrome atp-dependent helicase.
  
 
 0.787
FSPOR_11733
Exonuclease 1.
   
 0.756
FSPOR_2127
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.749
FSPOR_6555
Chromatin remodeling complex subunit; Belongs to the actin family.
    
 0.744
FSPOR_688
DNA-directed rna polymerases i.
    
 0.743
FSPOR_7870
Crossover junction endonuclease mus81.
   
 0.741
FSPOR_4442
DNA repair rhp55.
  
 
 0.704
FSPOR_9558
Histone acetyltransferase type b subunit 2.
    
 0.701
FSPOR_7877
DNA-directed rna polymerase ii subunit rpb4.
    
 0.698
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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