Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FSPOR_11085 | FSPOR_2553 | A0A395RI03 | A0A395SKA2 | Transcription initiation factor tfiif subunit alpha. | PHD domain-containing protein. | 0.994 |
| FSPOR_11085 | FSPOR_303 | A0A395RI03 | A0A395SUM4 | Transcription initiation factor tfiif subunit alpha. | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | 0.969 |
| FSPOR_11085 | FSPOR_3480 | A0A395RI03 | A0A395SGB3 | Transcription initiation factor tfiif subunit alpha. | Tata-box-binding. | 0.980 |
| FSPOR_11085 | FSPOR_3910 | A0A395RI03 | A0A395SEV9 | Transcription initiation factor tfiif subunit alpha. | Transcription initiation factor tfiib. | 0.991 |
| FSPOR_11085 | FSPOR_3972 | A0A395RI03 | A0A395SE33 | Transcription initiation factor tfiif subunit alpha. | Transcription factor. | 0.973 |
| FSPOR_11085 | FSPOR_4466 | A0A395RI03 | A0A395SC29 | Transcription initiation factor tfiif subunit alpha. | Uncharacterized protein. | 0.963 |
| FSPOR_11085 | FSPOR_5349 | A0A395RI03 | A0A395S828 | Transcription initiation factor tfiif subunit alpha. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.969 |
| FSPOR_11085 | FSPOR_7987 | A0A395RI03 | A0A395RX13 | Transcription initiation factor tfiif subunit alpha. | Transcription initiation factor tfiie subunit alpha. | 0.991 |
| FSPOR_11085 | FSPOR_8586 | A0A395RI03 | A0A395RTX3 | Transcription initiation factor tfiif subunit alpha. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.990 |
| FSPOR_11085 | FSPOR_9538 | A0A395RI03 | A0A395RPL1 | Transcription initiation factor tfiif subunit alpha. | DNA-directed rna polymerase ii subunit rpb11. | 0.978 |
| FSPOR_2553 | FSPOR_11085 | A0A395SKA2 | A0A395RI03 | PHD domain-containing protein. | Transcription initiation factor tfiif subunit alpha. | 0.994 |
| FSPOR_2553 | FSPOR_303 | A0A395SKA2 | A0A395SUM4 | PHD domain-containing protein. | General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. | 0.979 |
| FSPOR_2553 | FSPOR_3480 | A0A395SKA2 | A0A395SGB3 | PHD domain-containing protein. | Tata-box-binding. | 0.997 |
| FSPOR_2553 | FSPOR_3910 | A0A395SKA2 | A0A395SEV9 | PHD domain-containing protein. | Transcription initiation factor tfiib. | 0.995 |
| FSPOR_2553 | FSPOR_3972 | A0A395SKA2 | A0A395SE33 | PHD domain-containing protein. | Transcription factor. | 0.980 |
| FSPOR_2553 | FSPOR_4466 | A0A395SKA2 | A0A395SC29 | PHD domain-containing protein. | Uncharacterized protein. | 0.980 |
| FSPOR_2553 | FSPOR_5349 | A0A395SKA2 | A0A395S828 | PHD domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.728 |
| FSPOR_2553 | FSPOR_7987 | A0A395SKA2 | A0A395RX13 | PHD domain-containing protein. | Transcription initiation factor tfiie subunit alpha. | 0.982 |
| FSPOR_2553 | FSPOR_8586 | A0A395SKA2 | A0A395RTX3 | PHD domain-containing protein. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.993 |
| FSPOR_2553 | FSPOR_9538 | A0A395SKA2 | A0A395RPL1 | PHD domain-containing protein. | DNA-directed rna polymerase ii subunit rpb11. | 0.978 |
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