STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_4140Carboxylic ester hydrolase; Belongs to the tannase family. (519 aa)    
Predicted Functional Partners:
FSPOR_6715
Wd-repeat crb3.
   
 0.717
FSPOR_4396
Pre-rrna-processing ipi1.
   
 0.691
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.614
FSPOR_3994
Polynucleotide 5-hydroxyl-kinase grc3.
   
  0.532
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.529
FSPOR_10916
Nuclear gtp-binding protein nug1.
   
  0.500
FSPOR_7980
Calmodulin; Belongs to the calmodulin family.
    
  0.490
FSPOR_7000
Uncharacterized protein.
    
  0.490
FSPOR_268
Myosin regulatory light chain cdc4.
    
  0.490
FSPOR_9469
Uncharacterized protein.
    
  0.485
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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