Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FSPOR_1021 | FSPOR_1031 | A0A395SS05 | A0A395SS14 | Rhodanese domain-containing protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.908 |
FSPOR_1021 | FSPOR_1509 | A0A395SS05 | A0A395SP29 | Rhodanese domain-containing protein. | Sulfite oxidase. | 0.886 |
FSPOR_1021 | FSPOR_2787 | A0A395SS05 | A0A395SIM7 | Rhodanese domain-containing protein. | Cysteine desulfurase. | 0.819 |
FSPOR_1021 | FSPOR_3182 | A0A395SS05 | A0A395SGX6 | Rhodanese domain-containing protein. | Cytochrome-b5 reductase. | 0.908 |
FSPOR_1021 | FSPOR_3250 | A0A395SS05 | A0A395SGF0 | Rhodanese domain-containing protein. | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.729 |
FSPOR_1021 | FSPOR_4303 | A0A395SS05 | A0A395SD74 | Rhodanese domain-containing protein. | Uncharacterized protein. | 0.825 |
FSPOR_1021 | FSPOR_5925 | A0A395SS05 | A0A395S661 | Rhodanese domain-containing protein. | Sulfite oxidase. | 0.886 |
FSPOR_1021 | FSPOR_9877 | A0A395SS05 | A0A395RN85 | Rhodanese domain-containing protein. | Sulfite reductase ferredoxin. | 0.875 |
FSPOR_1021 | cnxH | A0A395SS05 | A0A395S7K0 | Rhodanese domain-containing protein. | Molybdopterin synthase catalytic subunit; Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group. | 0.902 |
FSPOR_1021 | uba4 | A0A395SS05 | A0A395RFE4 | Rhodanese domain-containing protein. | Adenylyltransferase and sulfurtransferase uba4; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers urm1 and MOCS2A. Its N-terminus first activates urm1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to urm1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...] | 0.781 |
FSPOR_1031 | FSPOR_1021 | A0A395SS14 | A0A395SS05 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Rhodanese domain-containing protein. | 0.908 |
FSPOR_1031 | FSPOR_1509 | A0A395SS14 | A0A395SP29 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Sulfite oxidase. | 0.951 |
FSPOR_1031 | FSPOR_3182 | A0A395SS14 | A0A395SGX6 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Cytochrome-b5 reductase. | 0.979 |
FSPOR_1031 | FSPOR_3250 | A0A395SS14 | A0A395SGF0 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.573 |
FSPOR_1031 | FSPOR_4303 | A0A395SS14 | A0A395SD74 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Uncharacterized protein. | 0.947 |
FSPOR_1031 | FSPOR_5925 | A0A395SS14 | A0A395S661 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Sulfite oxidase. | 0.951 |
FSPOR_1031 | FSPOR_9877 | A0A395SS14 | A0A395RN85 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Sulfite reductase ferredoxin. | 0.962 |
FSPOR_1031 | cnxH | A0A395SS14 | A0A395S7K0 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Molybdopterin synthase catalytic subunit; Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group. | 0.590 |
FSPOR_1031 | uba4 | A0A395SS14 | A0A395RFE4 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Adenylyltransferase and sulfurtransferase uba4; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers urm1 and MOCS2A. Its N-terminus first activates urm1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to urm1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...] | 0.567 |
FSPOR_1509 | FSPOR_1021 | A0A395SP29 | A0A395SS05 | Sulfite oxidase. | Rhodanese domain-containing protein. | 0.886 |
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