STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_3477Coatamer subunit. (790 aa)    
Predicted Functional Partners:
FSPOR_2752
Uncharacterized protein.
  
 0.986
FSPOR_6394
CID domain-containing protein.
   
 0.969
FSPOR_10914
Splicing factor 3a subunit 2.
    
 0.919
FSPOR_9596
U2 snrnp component prp10.
   
 0.917
FSPOR_6535
Pre-mrna-splicing factor atp-dependent rna helicase prp43.
   
 0.885
FSPOR_197
Pre-mrna-processing atp-dependent rna helicase prp5.
   
 0.876
FSPOR_11195
U2 small nuclear ribonucleoprotein a.
   
  0.842
FSPOR_10256
Uncharacterized protein.
   
 0.834
FSPOR_10847
Matrin-type domain-containing protein.
   
 0.818
FSPOR_103
Pre-mrna-splicing factor rse1.
    
 0.814
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.