STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_2524Uncharacterized protein. (707 aa)    
Predicted Functional Partners:
FSPOR_9484
DNA polymerase delta subunit 2.
    
 0.700
FSPOR_9495
DNA polymerase.
   
 0.682
FSPOR_10089
Survival motor neuronlike protein 1.
    
 0.679
FSPOR_7870
Crossover junction endonuclease mus81.
    
 0.674
FSPOR_9558
Histone acetyltransferase type b subunit 2.
    
  0.611
FSPOR_9749
Small nuclear ribonucleoprotein e.
   
  0.591
FSPOR_5577
DNA excision repair ercc-4.
    
 0.562
FSPOR_8463
Small nuclear ribonucleoprotein Sm D2.
    
  0.555
FSPOR_2242
Small nuclear ribonucleoprotein G.
    
  0.549
FSPOR_4013
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
  0.516
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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