STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_2303Endoribonuclease ysh1. (832 aa)    
Predicted Functional Partners:
FSPOR_11175
YTH domain-containing protein.
   
 0.999
FSPOR_2477
Cleavage and polyadenylation specificity factor subunit 2.
   
0.998
FSPOR_11327
Uncharacterized protein.
    
 0.996
FSPOR_4056
DUF3453 domain-containing protein.
   
 0.996
FSPOR_692
Polyadenylation factor subunit 2.
   
 0.996
FSPOR_8663
WD_REPEATS_REGION domain-containing protein.
   
 0.993
FSPOR_5363
Rna polymerase ii subunit a domain phosphatase ssu72.
   
 0.993
FSPOR_533
CPSF_A domain-containing protein.
   
 0.993
FSPOR_11425
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.991
FSPOR_4026
RRM domain-containing protein.
   
 0.991
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.