STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_2170GTP-binding ypt5. (220 aa)    
Predicted Functional Partners:
FSPOR_5696
Phosphatidylinositol 3-kinase VPS34.
    
 0.964
FSPOR_6000
Uncharacterized protein.
   
 0.948
FSPOR_2430
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.940
FSPOR_3782
Rab other.
  
 
 
0.891
FSPOR_3895
Vacuolar sorting-associated 9a.
    
 0.887
FSPOR_10818
VPS9 domain-containing protein.
    
 0.886
FSPOR_5384
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
    
 0.858
FSPOR_5312
Vacuolar sorting.
    
 
 0.819
FSPOR_2115
Ras rab7.
  
0.812
FSPOR_6509
Geranylgeranyl transferase type-2 subunit beta.
    
 0.810
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.