STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_1469Programmed cell death 5. (131 aa)    
Predicted Functional Partners:
FSPOR_1468
2-dehydropantoate 2-reductase.
 
      0.891
FSPOR_9749
Small nuclear ribonucleoprotein e.
   
    0.821
FSPOR_7417
50s ribosomal l11; Belongs to the universal ribosomal protein uL11 family.
  
    0.810
FSPOR_7194
60s ribosomal l30.
   
    0.801
FSPOR_194
60s ribosomal l35.
   
    0.792
FSPOR_11549
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
   
    0.790
FSPOR_1961
40s ribosomal s3; Belongs to the universal ribosomal protein uS3 family.
   
    0.783
FSPOR_8812
50s ribosomal l34e.
   
    0.781
FSPOR_465
60s ribosomal.
   
    0.780
FSPOR_9867
50s ribosomal protein l23ae.
   
    0.750
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.