Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FSPOR_1021 | FSPOR_1090 | A0A395SS05 | A0A395SRW2 | Rhodanese domain-containing protein. | Homocysteine s-methyltransferase. | 0.725 |
FSPOR_1021 | FSPOR_694 | A0A395SS05 | A0A395STI7 | Rhodanese domain-containing protein. | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | 0.739 |
FSPOR_1090 | FSPOR_1021 | A0A395SRW2 | A0A395SS05 | Homocysteine s-methyltransferase. | Rhodanese domain-containing protein. | 0.725 |
FSPOR_1090 | FSPOR_694 | A0A395SRW2 | A0A395STI7 | Homocysteine s-methyltransferase. | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | 0.663 |
FSPOR_1403 | FSPOR_694 | A0A395SPL1 | A0A395STI7 | 37s ribosomal. | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | 0.729 |
FSPOR_1403 | FSPOR_9324 | A0A395SPL1 | A0A395RR73 | 37s ribosomal. | Caax prenyl protease 2. | 0.702 |
FSPOR_2618 | FSPOR_694 | A0A395SJI1 | A0A395STI7 | Nudix hydrolase domain-containing protein. | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | 0.729 |
FSPOR_6403 | FSPOR_694 | A0A395S324 | A0A395STI7 | CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | 0.949 |
FSPOR_6403 | FSPOR_7158 | A0A395S324 | A0A395RZF4 | CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. | Mitochondrial metalloendopeptidase oma1. | 0.480 |
FSPOR_6403 | FSPOR_9324 | A0A395S324 | A0A395RR73 | CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. | Caax prenyl protease 2. | 0.978 |
FSPOR_694 | FSPOR_1021 | A0A395STI7 | A0A395SS05 | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | Rhodanese domain-containing protein. | 0.739 |
FSPOR_694 | FSPOR_1090 | A0A395STI7 | A0A395SRW2 | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | Homocysteine s-methyltransferase. | 0.663 |
FSPOR_694 | FSPOR_1403 | A0A395STI7 | A0A395SPL1 | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | 37s ribosomal. | 0.729 |
FSPOR_694 | FSPOR_2618 | A0A395STI7 | A0A395SJI1 | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | Nudix hydrolase domain-containing protein. | 0.729 |
FSPOR_694 | FSPOR_6403 | A0A395STI7 | A0A395S324 | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. | 0.949 |
FSPOR_694 | FSPOR_7158 | A0A395STI7 | A0A395RZF4 | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | Mitochondrial metalloendopeptidase oma1. | 0.696 |
FSPOR_694 | FSPOR_7598 | A0A395STI7 | A0A395RYD6 | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | Ras. | 0.729 |
FSPOR_694 | FSPOR_7848 | A0A395STI7 | A0A395RXN8 | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | Ras-2. | 0.729 |
FSPOR_694 | FSPOR_8715 | A0A395STI7 | A0A395RT52 | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | Ras other. | 0.729 |
FSPOR_694 | FSPOR_9324 | A0A395STI7 | A0A395RR73 | Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. | Caax prenyl protease 2. | 0.950 |
page 1 of 2