STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSPOR_36Uncharacterized protein. (123 aa)    
Predicted Functional Partners:
FSPOR_10264
Syntaxin 5.
    
 
 0.764
FSPOR_6550
Synaptobrevin like ykt6; Belongs to the synaptobrevin family.
    
 
 0.639
FSPOR_10087
Rud3-suppressor of uso1-1 transport defect.
    
   0.559
FSPOR_11026
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
   0.555
FSPOR_1232
Secreted glucosidase.
    
 
 0.553
FSPOR_9880
Raslike protein rab-6b.
    
 
 0.534
FSPOR_1917
Uncharacterized protein.
    
   0.483
FSPOR_7979
Syntaxin 16; Belongs to the syntaxin family.
    
   0.455
FSPOR_193
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 
 0.451
FSPOR_276
Vesicle transporter sec22; Belongs to the synaptobrevin family.
    
 
 0.440
Your Current Organism:
Fusarium sporotrichioides
NCBI taxonomy Id: 5514
Other names: F. sporotrichioides, Fusarium sporotrichiella var. sporotrichioides
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