Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS62755.1 | SIS70734.1 | SAMN05421796_101680 | SAMN05421796_102148 | Dihydroorotase. | Phosphoribosylformylglycinamidine synthase. | 0.520 |
SIS62755.1 | carA | SAMN05421796_101680 | SAMN05421796_102387 | Dihydroorotase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.990 |
SIS62755.1 | carB | SAMN05421796_101680 | SAMN05421796_102389 | Dihydroorotase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.991 |
SIS62755.1 | guaA | SAMN05421796_101680 | SAMN05421796_102292 | Dihydroorotase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.482 |
SIS62755.1 | guaB | SAMN05421796_101680 | SAMN05421796_107169 | Dihydroorotase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.459 |
SIS62755.1 | pyrB | SAMN05421796_101680 | SAMN05421796_102386 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
SIS62755.1 | pyrD | SAMN05421796_101680 | SAMN05421796_101368 | Dihydroorotase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.994 |
SIS62755.1 | pyrE | SAMN05421796_101680 | SAMN05421796_104110 | Dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.998 |
SIS70734.1 | SIS62755.1 | SAMN05421796_102148 | SAMN05421796_101680 | Phosphoribosylformylglycinamidine synthase. | Dihydroorotase. | 0.520 |
SIS70734.1 | carA | SAMN05421796_102148 | SAMN05421796_102387 | Phosphoribosylformylglycinamidine synthase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.986 |
SIS70734.1 | carB | SAMN05421796_102148 | SAMN05421796_102389 | Phosphoribosylformylglycinamidine synthase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.873 |
SIS70734.1 | guaA | SAMN05421796_102148 | SAMN05421796_102292 | Phosphoribosylformylglycinamidine synthase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.985 |
SIS70734.1 | guaB | SAMN05421796_102148 | SAMN05421796_107169 | Phosphoribosylformylglycinamidine synthase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.911 |
SIS70734.1 | metG | SAMN05421796_102148 | SAMN05421796_102277 | Phosphoribosylformylglycinamidine synthase. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.868 |
SIS70734.1 | pheT | SAMN05421796_102148 | SAMN05421796_102152 | Phosphoribosylformylglycinamidine synthase. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.981 |
SIS70734.1 | pyrB | SAMN05421796_102148 | SAMN05421796_102386 | Phosphoribosylformylglycinamidine synthase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.616 |
SIS70734.1 | pyrD | SAMN05421796_102148 | SAMN05421796_101368 | Phosphoribosylformylglycinamidine synthase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.643 |
SIS70734.1 | pyrE | SAMN05421796_102148 | SAMN05421796_104110 | Phosphoribosylformylglycinamidine synthase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.873 |
carA | SIS62755.1 | SAMN05421796_102387 | SAMN05421796_101680 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Dihydroorotase. | 0.990 |
carA | SIS70734.1 | SAMN05421796_102387 | SAMN05421796_102148 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Phosphoribosylformylglycinamidine synthase. | 0.986 |
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