Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS59171.1 | SIS77764.1 | SAMN05421796_101449 | SAMN05421796_103118 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | ADP-ribose pyrophosphatase YjhB, NUDIX family. | 0.519 |
SIS59171.1 | nadA | SAMN05421796_101449 | SAMN05421796_10520 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.998 |
SIS77751.1 | SIS77764.1 | SAMN05421796_103117 | SAMN05421796_103118 | Hypothetical protein. | ADP-ribose pyrophosphatase YjhB, NUDIX family. | 0.405 |
SIS77764.1 | SIS59171.1 | SAMN05421796_103118 | SAMN05421796_101449 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | 0.519 |
SIS77764.1 | SIS77751.1 | SAMN05421796_103118 | SAMN05421796_103117 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Hypothetical protein. | 0.405 |
SIS77764.1 | nadA | SAMN05421796_103118 | SAMN05421796_10520 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.519 |
nadA | SIS59171.1 | SAMN05421796_10520 | SAMN05421796_101449 | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | 0.998 |
nadA | SIS77764.1 | SAMN05421796_10520 | SAMN05421796_103118 | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | ADP-ribose pyrophosphatase YjhB, NUDIX family. | 0.519 |