Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS76306.1 | SIS76324.1 | SAMN05421796_10319 | SAMN05421796_10320 | Hypothetical protein. | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | 0.510 |
SIS76306.1 | SIS76343.1 | SAMN05421796_10319 | SAMN05421796_10321 | Hypothetical protein. | Lycopene cyclase domain-containing protein. | 0.510 |
SIS76306.1 | SIS76363.1 | SAMN05421796_10319 | SAMN05421796_10322 | Hypothetical protein. | Beta-carotene 3-hydroxylase. | 0.510 |
SIS76306.1 | SIS76378.1 | SAMN05421796_10319 | SAMN05421796_10323 | Hypothetical protein. | Ligand-binding SRPBCC domain-containing protein. | 0.510 |
SIS76306.1 | SIS76393.1 | SAMN05421796_10319 | SAMN05421796_10324 | Hypothetical protein. | Phytoene/squalene synthetase. | 0.510 |
SIS76306.1 | SIS76406.1 | SAMN05421796_10319 | SAMN05421796_10325 | Hypothetical protein. | Phytoene desaturase. | 0.507 |
SIS76324.1 | SIS76306.1 | SAMN05421796_10320 | SAMN05421796_10319 | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | Hypothetical protein. | 0.510 |
SIS76324.1 | SIS76343.1 | SAMN05421796_10320 | SAMN05421796_10321 | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | Lycopene cyclase domain-containing protein. | 0.834 |
SIS76324.1 | SIS76363.1 | SAMN05421796_10320 | SAMN05421796_10322 | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | Beta-carotene 3-hydroxylase. | 0.838 |
SIS76324.1 | SIS76378.1 | SAMN05421796_10320 | SAMN05421796_10323 | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | Ligand-binding SRPBCC domain-containing protein. | 0.899 |
SIS76324.1 | SIS76393.1 | SAMN05421796_10320 | SAMN05421796_10324 | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | Phytoene/squalene synthetase. | 0.902 |
SIS76324.1 | SIS76406.1 | SAMN05421796_10320 | SAMN05421796_10325 | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | Phytoene desaturase. | 0.910 |
SIS76343.1 | SIS76306.1 | SAMN05421796_10321 | SAMN05421796_10319 | Lycopene cyclase domain-containing protein. | Hypothetical protein. | 0.510 |
SIS76343.1 | SIS76324.1 | SAMN05421796_10321 | SAMN05421796_10320 | Lycopene cyclase domain-containing protein. | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | 0.834 |
SIS76343.1 | SIS76363.1 | SAMN05421796_10321 | SAMN05421796_10322 | Lycopene cyclase domain-containing protein. | Beta-carotene 3-hydroxylase. | 0.959 |
SIS76343.1 | SIS76378.1 | SAMN05421796_10321 | SAMN05421796_10323 | Lycopene cyclase domain-containing protein. | Ligand-binding SRPBCC domain-containing protein. | 0.867 |
SIS76343.1 | SIS76393.1 | SAMN05421796_10321 | SAMN05421796_10324 | Lycopene cyclase domain-containing protein. | Phytoene/squalene synthetase. | 0.946 |
SIS76343.1 | SIS76406.1 | SAMN05421796_10321 | SAMN05421796_10325 | Lycopene cyclase domain-containing protein. | Phytoene desaturase. | 0.942 |
SIS76363.1 | SIS76306.1 | SAMN05421796_10322 | SAMN05421796_10319 | Beta-carotene 3-hydroxylase. | Hypothetical protein. | 0.510 |
SIS76363.1 | SIS76324.1 | SAMN05421796_10322 | SAMN05421796_10320 | Beta-carotene 3-hydroxylase. | Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family. | 0.838 |
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