Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS54179.1 | SIS91227.1 | SAMN05421796_101203 | SAMN05421796_10640 | Hypothetical protein. | Membrane associated serine protease, rhomboid family. | 0.519 |
SIS60776.1 | SIS91227.1 | SAMN05421796_101545 | SAMN05421796_10640 | N-acetylmuramoyl-L-alanine amidase. | Membrane associated serine protease, rhomboid family. | 0.489 |
SIS60850.1 | SIS91227.1 | SAMN05421796_101551 | SAMN05421796_10640 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Membrane associated serine protease, rhomboid family. | 0.566 |
SIS91227.1 | SIS54179.1 | SAMN05421796_10640 | SAMN05421796_101203 | Membrane associated serine protease, rhomboid family. | Hypothetical protein. | 0.519 |
SIS91227.1 | SIS60776.1 | SAMN05421796_10640 | SAMN05421796_101545 | Membrane associated serine protease, rhomboid family. | N-acetylmuramoyl-L-alanine amidase. | 0.489 |
SIS91227.1 | SIS60850.1 | SAMN05421796_10640 | SAMN05421796_101551 | Membrane associated serine protease, rhomboid family. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.566 |
SIS91227.1 | SIS91239.1 | SAMN05421796_10640 | SAMN05421796_10641 | Membrane associated serine protease, rhomboid family. | Topoisomerase-4 subunit A. | 0.800 |
SIS91227.1 | SIS91248.1 | SAMN05421796_10640 | SAMN05421796_10642 | Membrane associated serine protease, rhomboid family. | Hypothetical protein. | 0.780 |
SIS91227.1 | SIS91260.1 | SAMN05421796_10640 | SAMN05421796_10643 | Membrane associated serine protease, rhomboid family. | Topoisomerase-4 subunit B. | 0.678 |
SIS91227.1 | SIS91470.1 | SAMN05421796_10640 | SAMN05421796_10658 | Membrane associated serine protease, rhomboid family. | Regulator of protease activity HflC, stomatin/prohibitin superfamily. | 0.739 |
SIS91227.1 | ftsH | SAMN05421796_10640 | SAMN05421796_101387 | Membrane associated serine protease, rhomboid family. | Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.551 |
SIS91227.1 | tatA | SAMN05421796_10640 | SAMN05421796_101675 | Membrane associated serine protease, rhomboid family. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.526 |
SIS91227.1 | tatA-2 | SAMN05421796_10640 | SAMN05421796_102368 | Membrane associated serine protease, rhomboid family. | Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.526 |
SIS91239.1 | SIS91227.1 | SAMN05421796_10641 | SAMN05421796_10640 | Topoisomerase-4 subunit A. | Membrane associated serine protease, rhomboid family. | 0.800 |
SIS91239.1 | SIS91248.1 | SAMN05421796_10641 | SAMN05421796_10642 | Topoisomerase-4 subunit A. | Hypothetical protein. | 0.799 |
SIS91239.1 | SIS91260.1 | SAMN05421796_10641 | SAMN05421796_10643 | Topoisomerase-4 subunit A. | Topoisomerase-4 subunit B. | 0.994 |
SIS91248.1 | SIS91227.1 | SAMN05421796_10642 | SAMN05421796_10640 | Hypothetical protein. | Membrane associated serine protease, rhomboid family. | 0.780 |
SIS91248.1 | SIS91239.1 | SAMN05421796_10642 | SAMN05421796_10641 | Hypothetical protein. | Topoisomerase-4 subunit A. | 0.799 |
SIS91248.1 | SIS91260.1 | SAMN05421796_10642 | SAMN05421796_10643 | Hypothetical protein. | Topoisomerase-4 subunit B. | 0.697 |
SIS91260.1 | SIS91227.1 | SAMN05421796_10643 | SAMN05421796_10640 | Topoisomerase-4 subunit B. | Membrane associated serine protease, rhomboid family. | 0.678 |
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