STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT03924.1Glutathione synthase/RimK-type ligase, ATP-grasp superfamily. (317 aa)    
Predicted Functional Partners:
SIT03916.1
Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
  
 0.975
SIT03931.1
Esterase/lipase superfamily enzyme.
 
     0.921
SIT03894.1
Hypothetical protein.
 
  
  0.916
SIT03904.1
GMP synthase-Glutamine amidotransferase.
 
     0.912
SIT03943.1
ATP-grasp domain-containing protein.
 
   
 0.896
SIT03965.1
Predicted hydrolase of the alpha/beta superfamily.
 
     0.819
SIT03953.1
Leucyl aminopeptidase; Belongs to the peptidase M17 family.
 
 
 0.719
SIT03881.1
Cyanophycin synthetase; Belongs to the MurCDEF family.
    
 0.475
SIT04016.1
2-oxoglutarate dehydrogenase E1 component.
   
 0.440
SIT02595.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
  0.413
Your Current Organism:
Chryseobacterium piscicola
NCBI taxonomy Id: 551459
Other names: C. piscicola, CECT 7357, Chryseobacterium piscicola Ilardi et al. 2009, Chryseobacterium sp. VQ-106r, Chryseobacterium sp. VQ-4836s, Chryseobacterium sp. VQ-6316s, DSM 21068, strain VQ-6316s
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