STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420665_00064Unannotated protein. (215 aa)    
Predicted Functional Partners:
GCA_000420665_00140
Unannotated protein.
  
  
 0.845
GCA_000420665_02253
Unannotated protein.
    
  0.832
GCA_000420665_02556
Unannotated protein.
    
  0.831
GCA_000420665_02449
Unannotated protein.
  
  0.826
GCA_000420665_02537
Unannotated protein.
  
  0.826
GCA_000420665_01187
Unannotated protein.
   
  0.819
GCA_000420665_02896
Unannotated protein.
   
   0.816
GCA_000420665_02904
Unannotated protein.
   
  0.796
GCA_000420665_01984
Unannotated protein.
   
  0.795
GCA_000420665_00689
Unannotated protein.
    
  0.786
Your Current Organism:
Ponticaulis koreensis
NCBI taxonomy Id: 551789
Other names: Hyphomonadaceae bacterium GSW-23, P. koreensis DSM 19734, Ponticaulis koreensis DSM 19734
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.