STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420665_01296Unannotated protein. (192 aa)    
Predicted Functional Partners:
GCA_000420665_02425
Unannotated protein.
   
 0.969
GCA_000420665_00144
Unannotated protein.
    
 
 0.937
GCA_000420665_00145
Unannotated protein.
    
 
 0.918
GCA_000420665_00781
Unannotated protein.
    
   0.914
GCA_000420665_01341
Unannotated protein.
  
 
 0.874
GCA_000420665_01952
Unannotated protein.
    
 
 0.781
GCA_000420665_01958
Unannotated protein.
    
   0.774
GCA_000420665_01048
Unannotated protein.
    
 0.728
GCA_000420665_01181
Unannotated protein.
    
 0.728
GCA_000420665_01279
Unannotated protein.
    
 0.728
Your Current Organism:
Ponticaulis koreensis
NCBI taxonomy Id: 551789
Other names: Hyphomonadaceae bacterium GSW-23, P. koreensis DSM 19734, Ponticaulis koreensis DSM 19734
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.