STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420665_02314Unannotated protein. (747 aa)    
Predicted Functional Partners:
GCA_000420665_02816
Unannotated protein.
 
 
 0.989
GCA_000420665_01385
Unannotated protein.
 
 
 0.972
GCA_000420665_00248
Unannotated protein.
 
 
 0.966
GCA_000420665_02577
Unannotated protein.
 
 
 0.938
GCA_000420665_00940
Unannotated protein.
   
 0.919
GCA_000420665_00043
Unannotated protein.
    
 0.912
GCA_000420665_02463
Unannotated protein.
     
 0.903
GCA_000420665_00338
Unannotated protein.
    
 0.901
GCA_000420665_02578
Unannotated protein.
    
  0.897
GCA_000420665_00271
Unannotated protein.
 
 
 0.896
Your Current Organism:
Ponticaulis koreensis
NCBI taxonomy Id: 551789
Other names: Hyphomonadaceae bacterium GSW-23, P. koreensis DSM 19734, Ponticaulis koreensis DSM 19734
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.