STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_000070Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (130 aa)    
Predicted Functional Partners:
CUMW_003820
Uncharacterized protein.
   
 0.983
CUMW_051560
Uncharacterized protein.
  
 0.980
CUMW_185130
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.976
CUMW_134280
Uncharacterized protein.
 
 0.972
CUMW_242000
Uncharacterized protein.
  
 0.972
CUMW_084920
Ribosomal_L18_c domain-containing protein.
  
 0.970
CUMW_170110
Ribosomal_L18_c domain-containing protein.
  
 0.970
CUMW_004550
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.969
CUMW_016910
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.969
CUMW_013260
Ribosomal_L5 domain-containing protein.
  
 0.968
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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