STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_272530Uncharacterized protein. (138 aa)    
Predicted Functional Partners:
CUMW_072620
Uncharacterized protein.
    
 0.724
CUMW_051290
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.664
CUMW_135390
Mg-por_mtran_C domain-containing protein.
     
 0.659
CUMW_063300
Nitroreductase domain-containing protein.
  
 
 0.645
CUMW_066990
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
   
 0.620
CUMW_030950
TPR_REGION domain-containing protein.
   
 0.592
CUMW_138920
Protein kinase domain-containing protein.
  
 0.585
CUMW_215320
E1_dh domain-containing protein.
  
 0.585
CUMW_131930
Isochorismatase domain-containing protein.
  
 0.569
CUMW_131920
Uncharacterized protein.
  
 0.569
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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