STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_280550Beta-hexosaminidase. (587 aa)    
Predicted Functional Partners:
CUMW_046230
Uncharacterized protein.
    
 0.919
CUMW_121300
Uncharacterized protein.
  
  0.919
CUMW_160240
Uncharacterized protein.
    
 0.919
CUMW_037530
Beta-galactosidase.
  
 
 0.900
CUMW_011510
Gb3_synth domain-containing protein.
   
 
  0.870
CUMW_128470
Gb3_synth domain-containing protein.
   
 
  0.870
CUMW_088620
Beta-hexosaminidase.
  
  
 
0.844
CUMW_104780
Beta-hexosaminidase.
  
  
 
0.843
CUMW_188350
GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly.
     
 0.839
CUMW_081210
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
 0.832
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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