STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_273600TBP-binding domain-containing protein. (130 aa)    
Predicted Functional Partners:
CUMW_184270
Uncharacterized protein.
   
 0.965
CUMW_104640
TAFII28 domain-containing protein.
    
 0.961
CUMW_108370
Uncharacterized protein.
    
 0.961
CUMW_180040
TAFII55_N domain-containing protein.
    
 0.961
CUMW_006050
TFIID_20kDa domain-containing protein.
    
 0.948
CUMW_036900
TFIID_20kDa domain-containing protein.
    
 0.948
CUMW_147630
TAF domain-containing protein.
    
 0.948
CUMW_159660
TAF domain-containing protein.
    
 0.948
CUMW_081340
Uncharacterized protein.
    
 0.942
CUMW_082000
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 0.942
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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