STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_004200Usp domain-containing protein. (193 aa)    
Predicted Functional Partners:
CUMW_118610
Uncharacterized protein.
    
 0.909
CUMW_171600
Uncharacterized protein.
   
 0.822
CUMW_167990
Uncharacterized protein.
    
 0.821
CUMW_022460
Uncharacterized protein.
    
 0.800
CUMW_032760
Uncharacterized protein.
    
 0.800
CUMW_264460
TPR_REGION domain-containing protein.
    
 0.781
CUMW_186210
Uncharacterized protein.
    
 0.774
CUMW_186200
Uncharacterized protein.
    
 0.774
CUMW_014650
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.694
CUMW_173540
Uncharacterized protein.
    
 0.692
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.