STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_275820Uncharacterized protein. (144 aa)    
Predicted Functional Partners:
CUMW_031570
PKS_AT domain-containing protein.
    
 0.877
CUMW_287420
CoA carboxyltransferase N-terminal domain-containing protein.
  
 0.874
CUMW_036620
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.873
CUMW_061090
Uncharacterized protein.
    
 0.873
CUMW_068230
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.873
CUMW_110030
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.873
CUMW_139670
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.873
CUMW_028090
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.866
CUMW_176650
CN hydrolase domain-containing protein.
    
 0.864
CUMW_144780
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
  0.843
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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