STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_282650Q_MOTIF domain-containing protein. (193 aa)    
Predicted Functional Partners:
CUMW_183440
Uncharacterized protein.
    
 0.822
CUMW_173870
Tr-type G domain-containing protein.
   
 0.816
CUMW_173860
Tr-type G domain-containing protein.
   
 0.816
CUMW_100010
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.806
CUMW_060170
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
   
 0.767
CUMW_064600
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.765
CUMW_110610
TOG domain-containing protein.
   
 0.764
CUMW_045730
Uncharacterized protein.
    
   0.743
CUMW_101860
RRM domain-containing protein.
   
 0.740
CUMW_182570
Uncharacterized protein.
    
 0.731
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
Server load: low (24%) [HD]