STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_285940GTP_EFTU_D3 domain-containing protein. (113 aa)    
Predicted Functional Partners:
CUMW_258790
Uncharacterized protein.
   
 0.994
CUMW_131340
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
  
 0.906
CUMW_129980
EF1_GNE domain-containing protein.
  
 0.904
CUMW_080950
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
  
 0.903
CUMW_155940
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
  
 0.902
CUMW_051560
Uncharacterized protein.
   
 0.885
CUMW_201300
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.829
CUMW_058860
Ribosomal_S10 domain-containing protein.
  
 0.805
CUMW_106160
Ribosomal_S10 domain-containing protein.
  
 0.805
CUMW_038880
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.794
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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