STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_026730Uncharacterized protein. (274 aa)    
Predicted Functional Partners:
CUMW_101020
Uncharacterized protein.
    
 0.877
CUMW_055500
Uncharacterized protein.
   
 0.844
CUMW_053980
Uncharacterized protein.
   
 0.789
CUMW_229870
Prohibitin.
   
 
 0.767
CUMW_103510
Uncharacterized protein.
    
 0.764
CUMW_097710
Autophagy protein 5; Required for autophagy.
     
 0.747
CUMW_052180
Uncharacterized protein.
   
 0.737
CUMW_054000
Mitochondrial Rho GTPase.
    
 0.733
CUMW_199440
Mitochondrial Rho GTPase.
    
 0.733
CUMW_192640
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 0.730
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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