STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_034140OBG-type G domain-containing protein. (524 aa)    
Predicted Functional Partners:
CUMW_185130
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.958
CUMW_079200
Uncharacterized protein.
  
 
 0.941
CUMW_071860
Uncharacterized protein.
  
 
 0.901
CUMW_206930
Uncharacterized protein.
  
 
 0.901
CUMW_121530
AA_kinase domain-containing protein.
  
 
 0.873
CUMW_140480
Uncharacterized protein.
  
 
 0.873
CUMW_011880
Uncharacterized protein.
  
 
 0.866
CUMW_046130
Uncharacterized protein.
  
 
 0.866
CUMW_002070
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.857
CUMW_187150
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.857
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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