STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_036420Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (480 aa)    
Predicted Functional Partners:
CUMW_042990
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.994
CUMW_231820
DUF5311 domain-containing protein.
  
 0.994
CUMW_223790
Uncharacterized protein.
   
 0.989
CUMW_110880
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.988
CUMW_226860
Nuclear pore protein.
   
 0.984
CUMW_079550
Nup54 domain-containing protein.
   
 0.980
CUMW_171430
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.980
CUMW_069830
Uncharacterized protein.
   
 0.978
CUMW_235060
C2H2-type domain-containing protein.
   
 0.978
CUMW_051760
Uncharacterized protein.
   
 0.976
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
Server load: low (24%) [HD]