CUMW_038510 protein (Citrus unshiu) - STRING interaction network

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Score

CUMW_038510

Uncharacterized protein. (260 aa)

Predicted Functional Partners:

CUMW_065140

0.641

CUMW_241310

0.617

CUMW_005540

0.607

CUMW_110610

0.586

CUMW_203250

0.579

CUMW_091400

0.572

CUMW_054140

0.566

CUMW_160050

0.559

CUMW_008190

0.550

CUMW_054880

0.541

Your Current Organism:

Citrus unshiu

NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUMW_005540	CUMW_008190	A0A2H5MYI8	A0A2H5N0Q9	Small nuclear ribonucleoprotein G.	Sm domain-containing protein.	0.998
CUMW_005540	CUMW_038510	A0A2H5MYI8	A0A2H5NET2	Small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.607
CUMW_005540	CUMW_054140	A0A2H5MYI8	A0A2H5NM14	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.999
CUMW_005540	CUMW_054880	A0A2H5MYI8	A0A2H5NMD0	Small nuclear ribonucleoprotein G.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.990
CUMW_005540	CUMW_065140	A0A2H5MYI8	A0A2H5NPY1	Small nuclear ribonucleoprotein G.	MIF4G domain-containing protein.	0.968
CUMW_005540	CUMW_091400	A0A2H5MYI8	A0A2H5NZZ9	Small nuclear ribonucleoprotein G.	Ubiquitin-like domain-containing protein.	0.913
CUMW_005540	CUMW_110610	A0A2H5MYI8	A0A2H5P7K7	Small nuclear ribonucleoprotein G.	TOG domain-containing protein.	0.967
CUMW_005540	CUMW_203250	A0A2H5MYI8	A0A2H5Q7I6	Small nuclear ribonucleoprotein G.	Cwf21 domain-containing protein.	0.973
CUMW_005540	CUMW_241310	A0A2H5MYI8	A0A2H5QLH2	Small nuclear ribonucleoprotein G.	Nuclear cap-binding protein subunit 2.	0.974
CUMW_008190	CUMW_005540	A0A2H5N0Q9	A0A2H5MYI8	Sm domain-containing protein.	Small nuclear ribonucleoprotein G.	0.998
CUMW_008190	CUMW_038510	A0A2H5N0Q9	A0A2H5NET2	Sm domain-containing protein.	Uncharacterized protein.	0.550
CUMW_008190	CUMW_054140	A0A2H5N0Q9	A0A2H5NM14	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.998
CUMW_008190	CUMW_054880	A0A2H5N0Q9	A0A2H5NMD0	Sm domain-containing protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.991
CUMW_008190	CUMW_065140	A0A2H5N0Q9	A0A2H5NPY1	Sm domain-containing protein.	MIF4G domain-containing protein.	0.967
CUMW_008190	CUMW_091400	A0A2H5N0Q9	A0A2H5NZZ9	Sm domain-containing protein.	Ubiquitin-like domain-containing protein.	0.918
CUMW_008190	CUMW_110610	A0A2H5N0Q9	A0A2H5P7K7	Sm domain-containing protein.	TOG domain-containing protein.	0.976
CUMW_008190	CUMW_203250	A0A2H5N0Q9	A0A2H5Q7I6	Sm domain-containing protein.	Cwf21 domain-containing protein.	0.969
CUMW_008190	CUMW_241310	A0A2H5N0Q9	A0A2H5QLH2	Sm domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.977
CUMW_038510	CUMW_005540	A0A2H5NET2	A0A2H5MYI8	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.607
CUMW_038510	CUMW_008190	A0A2H5NET2	A0A2H5N0Q9	Uncharacterized protein.	Sm domain-containing protein.	0.550