STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUMW_045940Uncharacterized protein. (473 aa)    
Predicted Functional Partners:
CUMW_141900
Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.
  
     0.506
CUMW_241960
Uncharacterized protein.
  
     0.483
CUMW_024860
Uncharacterized protein.
  
     0.462
CUMW_162560
Uncharacterized protein.
  
     0.461
CUMW_070260
Uncharacterized protein.
  
     0.456
CUMW_156150
Uncharacterized protein.
  
     0.449
CUMW_209000
Uncharacterized protein.
  
     0.449
CUMW_051690
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
  
     0.448
CUMW_087950
Uncharacterized protein.
  
     0.447
CUMW_251440
Uncharacterized protein.
  
     0.444
Your Current Organism:
Citrus unshiu
NCBI taxonomy Id: 55188
Other names: C. unshiu, Citrus unshiu Marcow., Satsuma orange, satsuma mandarin
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